Enterprise IT is evolving rapidly. The rise of hybrid work, BYOD (Bring Your Own Device), and remote access has completely reshaped how organizations oversee their devices. However, traditional management solutions are struggling to keep pace:
- Manual updates create security vulnerabilities
- Inconsistent policies generate compliance risks
- Unmanaged devices from remote employees compromise the network
These issues become overwhelming for IT teams, particularly when managing hundreds or thousands of endpoints across diverse locations.
Intune Device Management provides an innovative, cloud-native solution that addresses these difficulties head on. It enables businesses to remotely protect, update, and monitor all devices, including company-issued laptops, personal smartphones, and frontline tablets. With Intune Device Management, every endpoint is safe and compliant without disturbing daily operations.
Understanding Microsoft Intune: What It Does & How It Works
Now that we’ve set the stage, let’s break down what Microsoft Intune actually does and why IT leaders swear by it.
What is Microsoft Intune? (Explained for IT Professionals & Decision-Makers)
At its core, Microsoft Intune is a cloud-based endpoint management solution that helps organizations secure and control company devices, applications, and data—no matter where they are.
For IT admins and decision-makers, this means:
Centralized device management – Configure, track, and update devices from a single cloud dashboard.
Automated security enforcement – Apply policies that keep corporate data secure, even on personal (BYOD) devices.
Seamless integration – Works with Microsoft 365, Azure AD, and other Microsoft security tools.
Whether you’re managing Windows, macOS, iOS, or Android devices, Intune ensures compliance and security at scale—without the manual headaches.
Intune MDM vs. Intune MAM – What’s the Difference?
Many IT teams get confused between Mobile Device Management (MDM) and Mobile Application Management (MAM) in Intune. Here’s the difference:
Intune MDM (Mobile Device Management):
- Controls the entire device (company-owned or personal).
- Enforces security policies like password requirements, encryption, and remote wipe.
- Ideal for corporate devices that need full management.
Intune MAM (Mobile Application Management):
- Controls only the corporate apps and data, not the device itself.
- Secures apps like Outlook, Teams, and OneDrive without managing the user’s personal device.
- Ideal for BYOD scenarios, where employees use personal devices for work.
Why does it matter?
- If your company provides work-issued laptops and phones, go with MDM.
- If employees use personal devices for work, MAM lets you secure corporate data without invading privacy.
How Intune Works with Microsoft Endpoint Manager & Azure AD
Microsoft Intune isn’t a standalone tool—it’s part of a bigger security ecosystem, including:
Microsoft Endpoint Manager (MEM) – A centralized platform that combines Intune + Configuration Manager for full endpoint security.
Azure Active Directory (Azure AD) – Ensures only authorized users and devices can access company resources, enforcing Zero Trust security.
Microsoft Defender – Adds advanced threat protection against cyber threats and malware.
This seamless integration means IT teams can enforce security policies across the entire enterprise from one unified platform.
Real-World Use Cases: How Enterprises Use Intune
Let’s see how large organizations are using Microsoft Intune to solve real IT challenges.
1. Enforcing Security Compliance in Remote Work
Problem: Employees work from different locations, using various devices. How do you ensure security compliance without micromanaging?
Solution: Intune automates device configuration, security updates, and access policies so every endpoint meets compliance—no matter where it is.
2. Managing BYOD Securely (Without Invading Privacy)
Problem: Employees don’t want IT to control their personal devices, but companies need to protect corporate data.
Solution: Intune’s MAM (Mobile Application Management) allows IT to secure corporate apps and data without touching personal files.
3. Implementing Zero Trust Security for Enterprise IT
Problem: Traditional security models trust devices inside the corporate network—but remote work and cloud apps have changed the game.
Solution: Intune works with Azure AD Conditional Access to verify every device, enforce policies, and block unauthorized access.
Microsoft Intune vs. Competitors: Why It’s the Go-To Choice for Enterprises
Managing company devices shouldn’t feel like putting out fires all day. But for a lot of IT teams, that’s exactly what it is—one issue after another, from security risks to software updates that just won’t install properly.
There are a bunch of solutions out there that claim to make this easier—Jamf, VMware Workspace ONE, Google Endpoint Management—but which one actually helps you get control over your devices without adding extra work?
Let’s break it down.
How Does Microsoft Intune Stack Up?
If your company is already using Microsoft 365, Windows, or Azure, Intune is the natural choice. But how does it compare to the competition?
Why Enterprise IT Teams Prefer Microsoft Intune
If you’re spending hours managing devices manually, tracking down security gaps, or trying to enforce policies across multiple locations, Intune can take that stress off your plate.
Here’s why enterprises stick with Microsoft Intune device management:
- It scales with you. Whether you’re managing 500 devices or 50,000, everything stays organized.
- Security is automatic. You can remotely wipe lost devices, enforce security policies, and block unauthorized access—without extra software.
- Less hands-on work. Set policies once, and every device follows them. No need to configure things one by one.
- It works across all major platforms. Unlike Jamf (Apple-only) or Google Endpoint (limited to ChromeOS and Android), Intune covers Windows, macOS, iOS, and Android.
- No extra setup if you’re already using Microsoft 365. It integrates with your existing tools, so you’re not spending weeks on setup.
Where Intune Falls Short
Of course, no tool is perfect. Here are a few things to keep in mind:
- Not ideal for Apple-only setups. If your company is 100% Mac/iOS, Jamf Pro is built specifically for that.
- Takes time to get familiar with. If your IT team isn’t already using Microsoft 365, Azure AD, or Endpoint Manager, there’s a bit of a learning curve.
- Can get expensive if you’re not already in the Microsoft ecosystem. Intune is included in Microsoft 365 enterprise plans, but if your company doesn’t use Microsoft tools, you’ll need to pay for separate licensing.
So, When Should You Choose Intune?
- You manage thousands of devices and need a way to control everything from one place.
- Your company already runs on Microsoft 365, Azure AD, or Windows.
- You need a secure, automated way to manage both company-owned and personal devices.
- You don’t want IT spending hours manually updating, configuring, or troubleshooting devices.
If your company is deep into Google Workspace or fully Apple-based, Intune might not be the best fit. But if you’re in the Microsoft ecosystem, it’s the best way to simplify device management, improve security, and cut down on IT headaches.
Step-by-Step Guide: Setting Up Intune for Secure Device Management
Rolling out Microsoft Intune device management doesn’t have to be complicated. The goal is simple: get all company devices under one secure system, enforce policies without manual work, and keep everything updated without IT teams constantly chasing down issues.
If you want to set up Intune the right way, here’s what you need to do.
Step 1: Get the Basics in Place
Before you jump into device enrollment, make sure you have everything lined up.
- Licenses – Every user or device you manage with Intune needs a valid license. It’s included in Microsoft 365 E3 and E5 plans, or you can get it as a standalone.
- Azure AD – Intune works closely with Azure Active Directory (Azure AD) for managing user access and security.
- Admin Access – IT admins need the right permissions to set up and manage Intune.
- Security Policies – Decide on password rules, encryption settings, and access restrictions before rolling out Intune.
Once you’ve got these basics covered, you’re ready to start enrolling devices.
Step 2: Enrolling Devices into Intune
Device enrollment is where Intune starts working. This step makes sure all company laptops, desktops, phones, and tablets can be managed remotely.
How to Enroll Devices
For Windows Devices:
- Sign in to the Intune admin center.
- Go to Devices > Windows enrollment.
- Choose Automatic Enrollment (best for large organizations).
- Set up policies for company-owned or personal (BYOD) devices.
- Employees sign in with their work credentials, and Intune takes over from there.
For macOS:
- Install the Intune Company Portal app on Mac devices.
- Enable the Apple MDM Push Certificate in Intune (this lets you manage Apple devices).
- Set up enrollment policies for Mac users.
- Employees sign in and complete enrollment through the Company Portal app.
For iOS & Android:
- Enable Apple MDM & Android Enterprise in Intune settings.
- Set up enrollment profiles (BYOD or company-owned).
- Deploy the Intune Company Portal app to enforce policies.
- Users sign in, and security rules are applied automatically.
Best Practices for Large-Scale Deployments:
- Use Windows Autopilot or Apple Business Manager for zero-touch deployment.
- Set up Multi-Factor Authentication (MFA) for security.
- Organize devices into groups based on teams (HR, Sales, IT) for better management.
Step 3: Setting Up Security Policies
Once devices are enrolled, the next step is making sure they meet security and compliance standards.
Key Security Policies to Apply in Intune
Device Compliance Policies
- Require strong passwords (length, complexity, expiration rules).
- Make encryption mandatory to protect company data.
- Enable remote lock and wipe for lost or stolen devices.
Application & Software Update Policies
- Push security updates automatically to all devices.
- Restrict employees from downloading unauthorized apps.
- Force app updates to keep everything current and secure.
Conditional Access for Extra Security
- Only allow access from compliant devices.
- Require multi-factor authentication for sensitive apps.
- Block outdated devices from logging into corporate systems.
These policies keep your entire device fleet secure, without IT teams having to check every device manually.
Step 4: Managing Apps & Software Updates
Keeping apps and software updated is one of the easiest ways to prevent security risks.
How Intune Helps with Application Management:
- Install Microsoft 365 apps and other business tools automatically.
- Restrict access to only approved company apps.
- Protect sensitive work data on personal devices with App Protection Policies.
Keeping Software & OS Updated Without Interruptions:
- Enable Windows Update for Business to automate security patches.
- Set up update rings to roll out updates in phases (test first, then deploy company-wide).
- Schedule updates for off-hours so employees aren’t interrupted.
Setting up Microsoft Intune mobile management doesn’t have to be a headache. Once it’s in place, your IT team won’t have to chase people down for security updates, worry about outdated devices, or manually enforce policies.
Common Intune Issues & How to Fix Them (Troubleshooting Guide)
Even with the best setup, things don’t always go smoothly. Devices don’t sync, policies don’t apply, and sometimes, users can’t enroll at all. It’s frustrating, but the good news? Most Microsoft Intune device management issues have simple fixes.
Let’s go through some of the most common problems IT teams face—and how to solve them.
Problem 1: Intune Policies Aren’t Applying Instantly
Ever set up a security policy only to find that devices aren’t picking it up right away? You’re not alone. Intune policies don’t always apply instantly, and that can make it seem like something’s broken.
Why this happens:
- Intune doesn’t push policies in real-time; it relies on scheduled syncs.
- Devices might not be connected to the internet at the time of deployment.
- Users may not have signed in after the policy was applied.
How to fix it:
- Manually sync devices – Ask users to go to Settings > Accounts > Access work or school (on Windows) and click Sync.
- Force an Intune sync from the Intune admin center:
- Go to Devices > All Devices, select the device, and choose Sync.
- Check policy status in Intune > Devices > Monitor > Configuration Profiles to see if there are errors.
Still not working? Give it some time. Most policies apply within 15-30 minutes, but some settings take longer.
Problem 2: Devices Won’t Enroll in Intune
Enrollment failures are one of the most common headaches IT teams face. If a device won’t enroll, it’s usually because of permission issues, outdated OS versions, or conflicts with other management tools.
How to fix it:
- Check licensing – Make sure the user has a Microsoft Intune license assigned.
- Ensure the device isn’t already managed – If the device is enrolled in another MDM (like VMware Workspace ONE or Google Endpoint Management), it won’t work with Intune.
- Confirm enrollment settings – In Intune, go to Devices > Enrollment restrictions and ensure the device type isn’t blocked.
- Update the OS – Older Windows, iOS, or Android versions may not support Intune enrollment. Make sure everything is up to date.
- Try a fresh start – If nothing else works, remove the device from Intune and try enrolling again.
Problem 3: Devices Show as “Non-Compliant”
You’ve set up compliance policies, but some devices still show up as non-compliant in the Intune admin center. This usually means the device isn’t meeting one or more security requirements.
Common reasons for non-compliance:
- The user hasn’t updated their password to meet security policies.
- The device doesn’t have encryption enabled.
- A required app or update is missing.
How to fix it:
- Check compliance settings – In Intune > Devices > Monitor > Compliance, see what rule the device is failing.
- Send a reminder – Ask users to update their passwords or install missing updates.
- Force a compliance check – Users can go to Settings > Accounts > Work or school on Windows and hit Sync.
- Enable auto-remediation – Set up Intune’s remediation policies to automatically apply missing settings.
Problem 4: Intune Policies Are Rolling Out Too Slowly
When managing thousands of devices, IT teams can’t afford to wait hours for policy changes to take effect. If deployments are slow, here’s how to speed them up.
How to fix it:
- Reduce policy complexity – The more policies assigned to a device, the longer it takes to process them. Keep policies streamlined.
- Check Azure AD groups – If policies are assigned to large dynamic groups, processing may take longer. Try assigning policies to smaller, static groups where possible.
- Manually push policies – In Intune > Devices > Configuration Profiles, select a policy and choose Re-evaluate compliance to force an update.
- Use Windows Update for Business – Instead of relying on Intune alone, use Windows Update for Business to streamline OS updates.
Intune is a powerful tool, but like any system, things don’t always work perfectly. The key is knowing where to look when problems arise.
How CyberQuell Helps with Intune Device Management
Setting up Microsoft Intune device management is one thing—making sure it runs smoothly across your entire organization is another. That’s where CyberQuell comes in.
We don’t just help businesses deploy Intune. We make sure it works seamlessly for your specific IT environment, security needs, and compliance requirements.
Tailored Intune Deployment
Whether you're managing a remote workforce or securing on-premises devices, we tailor the setup to your specific needs. A one-size-fits-all approach doesn’t work when it comes to Microsoft Intune device management. That’s why CyberQuell helps businesses:
- Configure intune mobile device management for Windows, macOS, iOS, and Android.
- Set up enrollment policies to align with company security and compliance requirements.
- Ensure seamless integration with Azure AD and Microsoft Endpoint Manager.
We make sure Intune works exactly the way you need it to—without unnecessary complexity.
Security and Compliance Optimization
The default settings in Intune are a good starting point, but they don’t provide maximum security out of the box. CyberQuell helps businesses take security to the next level by:
- Using Conditional Access policies to enforce Zero Trust security.
- Setting up encryption, password policies, and endpoint protection to ensure compliance.
- Securing BYOD without hindering staff productivity.
The result?
A device management strategy that protects your data while keeping IT operations efficient.
Ongoing Support and Troubleshooting
Intune isn’t a “set it and forget it” tool. Issues pop up—whether it’s devices failing to sync, policies not applying, or compliance errors. Instead of spending hours troubleshooting, CyberQuell provides:
- Proactive monitoring to catch issues before they disrupt operations.
- Fast troubleshooting for enrollment failures, non-compliance alerts, and security gaps.
- Ongoing policy adjustments as your IT environment evolves.
We make sure Intune keeps working for you, so your IT team can focus on bigger priorities.
Let’s Make Intune Work for Your Business
Deploying Microsoft Intune mobile management is just the first step. Optimizing it for security, compliance, and scalability is where CyberQuell adds real value.
With our expertise, your IT team can:
- Get full control over company devices without the hassle.
- Reduce security risks with the right policies in place.
- Ensure a smooth experience for employees—whether they’re in the office or remote.
Need help implementing or fine-tuning your Intune setup? CyberQuell has you covered. Book a call with us